Original Research
Original research
David Virant*, Bjoern Traenkle*, Julia Maier, Philipp D. Kaiser, Mona Bodenhöfer, Christian Schmees, Ilijana Vojnovic, Borbála Pisak-Lukáts, Ulrike Endesfelder#, Ulrich Rothbauer#
A peptide tag-specific nanobody enables high-quality labeling for dSTORM imaging.
Nature communications, 9(1), 930; 2018. 10.1038/s41467-018-03191-2.
∗Authors contributed equally. #Corresponding authors.
Highlighted in Tools in brief, Nat Meth 15(4), 246, 2018.
Christian Baarlink, Matthias Plessner, Alice Sherrard, Kohtaro Morita, Shinji Misu, David Virant, Eva-Maria Kleinschnitz, Robert Harniman, Dominic Alibhai, Stefan Baumeister, Kei Miyamoto, Ulrike Endesfelder, Abderrahmane Kaidi, Robert Grosse
A transient pool of nuclear F-actin at mitotic exit controls chromatin organization
Nature cell biology 19 (12), 1389-1399, 2017. 10.1038/ncb3641.
Highlighted in News & views, Nat Cell Biol 19, 1386–1388, 2017.
David Virant, Bartosz Turkowyd, Alexander Balinovic, Ulrike Endesfelder
Combining Primed Photoconversion and UV-Photoactivation for Aberration-Free, Live-Cell Compliant Multi-Color Single-Molecule Localization Microscopy Imaging
International journal of molecular sciences 18 (7), 1524, 2017. 10.3390/ijms18071524.
Part of the special issue Fluorescent proteins.
Bartosz Turkowyd∗, Alexander Balinovic∗, David Virant, Haruko G Gölz Carnero, Fabienne Caldana, Marc Endesfelder, Dominique Bourgeois, Ulrike Endesfelder
A general mechanism of photoconversion of green‐to‐red fluorescent proteins based on blue and infrared light reduces phototoxicity in live‐cell single‐molecule imaging
Angewandte Chemie International Edition 56 (38), 11634-11639, 2017. 10.1002/anie.201702870.
∗Authors contributed equally. Highlighted in Analytical Chemistry.
German version Ein allgemeiner Mechanismus der Photokonvertierung von grün‐zu‐rot fluoreszierenden Proteinen unter blauem und infrarotem Licht reduziert Phototoxität in der Einzelmolekülmikroskopie von lebenden Zellen.
Matthieu Palayret, Helen Armes, Srinjan Basu, Adam T Watson, Alex Herbert, David Lando, Thomas J Etheridge, Ulrike Endesfelder, Mike Heilemann, Ernest Laue, Antony M Carr, David Klenerman, Steven F Lee
Virtual-'light-sheet'single-molecule localisation microscopy enables quantitative optical sectioning for super-resolution imaging
PLoS One 10 (4), e0125438, 2015. 10.1371/journal.pone.0125438.
Reviews & book chapters
Reviews & book chapters
Ilijana Vojnovic, Ulrike Endesfelder
Beginner’s guide to producing super-resolved images on a widefield fluorescence microscope
The Biochemist, 2020. 10.1042/BIO20200045.
Ulrike Endesfelder
Trendbericht Biochemie: Hochaufgelöste Zellbiologie
Nachrichten aus der Chemie 68 (7-8), 49-51; 2020. 10.1002/nadc.20204099591.
Kevin Kramm, Ulrike Endesfelder, Dina Grohmann
A single-molecule view of archaeal transcription
Journal of molecular biology 431 (20), 4116-4131, 2019. 10.1016/j.jmb.2019.06.009.
Ilijana Vojnovic, Jannik Winkelmeier, Ulrike Endesfelder
Visualizing the inner life of microbes: practices of multi-color single-molecule localization microscopy in microbiology
Biochemical Society Transactions 47 (4), 1041-1065, 2019. 10.1042/BST20180399.
Ulrike Endesfelder
From single bacterial cell imaging towards in vivo single-molecule biochemistry studies
Essays in biochemistry 63 (2), 187-196, 2019. 10.1042/EBC20190002.
Part of the special issue on Single Cell Biology.
Ulrike Endesfelder
Super‐Resolution Microscopy. A Practical Guide. Von Udo J. Birk.
Angewandte Chemie 130 (27), 8067-8067, 2018. 10.1002/ange.201804434.
Christoph Spahn, Ulrike Endesfelder, Mike Heilemann
Super-Resolution Fluorescence Microscopy of the Nanoscale Organization of RNAP and DNA in E. coli
Super-Resolution Imaging in Biomedicine 259, CRC Press, 2016. 10.4324/9781315372884.
Ulrike Endesfelder
Photoswitching Fluorophores in Super-Resolution Fluorescence Microscopy
Super-Resolution Imaging in Biomedicine 49, CRC Press, 2016. 10.4324/9781315372884.
Bartosz Turkowyd*, David Virant*, Ulrike Endesfelder
From single molecules to life: microscopy at the nanoscale
Analytical and Bioanalytical Chemistry 408 (25), 6885-6911, 2016. 10.1007/s00216-016-9781-8.
∗Authors contributed equally.
Theses
Theses
Doctoral theses
David Virant
Studying large multi-protein complexes using single-molecule localization microscopy
PhD, Marburg University, Biology, 2019.
Bartosz Turkowyd
Studies of single molecule dynamics in microorganisms
PhD, Marburg University, Biology, 2019.
Master theses
Samiha Ali Nahiyan
Quantifying the motion of diffusing fluorescent beads by Single Particle Tracking (SPT)
Bochum University, Elektrotechnik und Informationstechnik, 2021.
Haruko Gölz
Entwicklung photoaktivierbarer Varianten des fluoreszierenden Proteins mScarlet
Frankfurt University, Chemistry, 2018.
Jannik Winkelmeier
Cellular division of Schizosaccharomyces pombe studied by single molecule localization microscopy
Frankfurt University, Biophysics, 2018.
Alexander Balinovic
Characterizing the suitability of commonly used photoconvertible fluorescent proteins and new mutants for live-cell single molecule localization microscopy imaging strategies.
Frankfurt University, Chemistry, 2017.
Ilijana Vojnovic
Spatial and temporal organization of the kinetochore proteins sad1, cut12 and cnp1 in Schizosaccharomyces pombe studied by fluorescence single molecule methods at a nanometer resolution.
Frankfurt University, Chemistry, 2016.
Bachelor theses
Vanessa Climenti
Developing new tools for advanced sptPALM applications
Marburg University, Biology, 2019.
Michael Rigl
Creating new triple-color strains to investigate the kinetochore complex in Schizosaccharomyces pombe by single-molecule localization microscopy
Marburg University, Biology, 2019.
Marco Hui
Benchmarking sptPALM measurements of protein diffusion dynamics in Escherichia coli cells
Marburg University, Physics, 2018.
Kai Schmidt
Konstruktion und Charakterisierung von fluoreszenzmarkierten Kinetochorproteinen der Spalthefe Schizosaccharomyces pombe.
Frankfurt University, Chemistry, 2017.
Popular science
Popular science texts
Ulrike Endesfelder
Perspektiven wechseln - Die Welt aus Sicht der Mikroben
Article in Kalender Perspektiven wechseln 2020
Jan Thorbecke Verlag, 2020. ISBN: 978-3-7995-1370-8
Ulrike Endesfelder
Einblicke in das tiefste Innere von lebenden Zellen
Forschungsbericht 2018 - Max-Planck-Institut für terrestrische Mikrobiologie
Forschungsbericht 2018, 10.17617/1.6P.
English summary Insights into the inner life of living cells
Jonas Peters, Ulrike Endesfelder, Miriam Akkermann
Ich frag' ja nur - Grenzen unseres Wissens
Kalender 2019, Ich frag' ja nur - Grenzen unseres Wissens
Jan Thorbecke Verlag, 2018. ISBN: 978-3-7995-1270-1
Ulrike Endesfelder, Miriam Akkermann
Historische Kalender – Aktuelle Forschung
Kalender 2018, Historische Kalender – Aktuelle Forschung
Jan Thorbecke Verlag, 2017. ISBN: 978-3-7995-1191-9.
Ulrike Endesfelder
Wir können live beobachten, wie genetische Codes kopiert werden
Junge Akademie Magazin 23, 6-13, 2017.
english version We’re able to watch genetic codes copied right in front of our eyes
Ulrike Endesfelder
Von einzelnen Molekülen zur lebendigen Materie
Article in Kalender Neuland 2017
Thorbecke Verlag, 2016. ISBN: 978-3-7995-1078-3.
Ulrike Endesfelder
Hochaufgelöste Zellbiologie
BIOspektrum 22 (2), 217-217, 2016. 10.1007/s12268-016-0675-2.
Mike Heilemann, Christoph Spahn, Ulrike Endesfelder
Von schaltbaren Farbstoffen zu scharfen Bildern - Hochauflösende Fluoreszenzmikroskopie in Bakterien
GIT Labor-Fachzeitschrift 7/2015, 24-28, 2015.
Science policy
Science policy texts
Martin Dresler, Eva Buddeberg, Ulrike Endesfelder, Jan Haaker, Christian Hof, Robert Kretschmer, Dirk Pflüger, Fabian Schmidt
Why many funding schemes harm rather than support research
Nat Hum Behav, 2022. 10.1038/s41562-021-01286-3
Ulrike Endesfelder, Dirk Pflüger, Timo de Wolff
#StopPandemicBias: scientists, share your privilege
Nature 583, 683, 2020, 10.1038/d41586-020-02234-3.
Jule Specht, Christian Hof, Julia Tjus, Wolfram Pernice, Ulrike Endesfelder
Departments statt Lehrstühle: Moderne Personalstruktur für eine zukunftsfähige Wissenschaft
Die Junge Akademie, 2017, ISBN 978-3-00-057956-1.
English version Replacing professorial chairs with departments: a modern HR structure for a sustainable higher education system.
Ulrike Endesfelder
Beruf Wissenschaftlerin - Eine deutsch-japanische Konferenz über Gleichstellung und Chancen in der Wissenschaft.
Junge Akademie Magazin, 21, 46-48, 2016.
English version Female academics: A German-Japanese conference on equality and opportunity in academia.
Jule Specht, Ulrike Endesfelder, Tobias Erb, Christian Hof, Wolfram Pernice
Die Bundesprofessur: eine personenbezogene, langfristige Förderung im deutschen Wissenschaftssystem : Debattenbeitrag der AG Wissenschaftspolitik der Jungen Akademie
Die Junge Akademie, 2016, ISBN 978-3-00-053002-9.